Friday, May 2, 2014

EVOLUTION OF MACROMOLECULES

Natural Selection and Macromolecules

DNA

The larger organic molecules found in living organisms are called macromolecules because of their large size.  They are primarily proteins, carbohydrates, and nucleic acids.  Many of them function within the cells where they were formed.  But the most important or central one to biology and evolution is DNA, a nucleic acid.

The long, linear double-stranded molecules of DNA are coiled in helices of chromosomes enclosed within the nucleus of animal and plant cells.  How the purine and pyrimidine base combinations along the molecule function, to duplicate the DNA sequence and form RNA and proteins to do the work of the cell, was a mystery until the code units were first determined by Watson and Crick in the mid 1950’s.

Determining the DNA code of humans then became a major priority for geneticists and molecular biologists throughout the world.  Francis Collins was a leader among those heading the Human Genome Project, which with others determined the sequence.  Along the way of his scientific journey he made a transition from atheism to belief in God.  He describes many aspects of the journey in his 2006 book, The Language of God*.

When I read the book in 2007 I thought he had written the book I was trying to write.  He also finds evolution by means of natural selection a basically true scientific explanation.  He does a good job of refuting creationist arguments.  He does a much better job explaining the molecular side of evolution in the genetics area than I could possibly do.  If you want to know that, please read his book.  If you don’t want the details, please read the introduction and first chapter of his book.  It is great food for thought.

Macromolecules in cells

Some macromolecules have an important structural function outside of cells.  The protein, collagen, functions as a connective tissue fiber in tendons, ligaments, and separate fibers of  loose connective tissue of many animals such as ourselves.  It, and the spongin fibers in sponge tissue, are similar proteins and are the only proteins that release the amino acid hydroxyproline when hydrolyzed.  The collagen fiber networks in bone are the primary protein portion strengthening the crystallized calcium compounds of mineralized bone.

Keratin is a protein important in hair, nails, and horns of some mammals.  Chitin is a polymer of acetyl glucosamine, the structural protein of insect and other arthropod exoskeletons.

Within the cells, DNA has functions demonstrating many of the potential functions cell molecules may have.  Slight changes in function can be eliminated or incorporated in subsequent generations depending on accompanying rates of survival.

            Localization.  The DNA can keep functional parts (genes) in close association.  Then necessary interactions can be accomplished efficiently.  It provides a better opportunity for functional clusters to be passed on to offspring during reproduction.
            Retention.  They are easily retained by the cell as well as by the nucleus.
            Storage.  The information coded can be kept and then passed on to subsequent generations.  The individual’s DNA cannot be effectively built up and depleted, like carbohydrate and fat nutrient reserves, except through cell division or cell death.
            Reduced osmotic impact.  The approximately four dozen molecules of DNA in each human cell have less osmotic impact than most other major components of the fluid portion of the cell that do not readily permeate the cell membrane.
            Reduced chemical reactivity.  Relative to size, reactivity of DNA is far below that of most small organic compounds.
            Diversity.  We are each unique in our DNA, as are most species.
            Reproduction.  DNA contains the information needed to develop within a functioning cell the machinery to duplicate itself and make the other changes necessary for reproduction of the species.  The plan is there.  All it needs is a functioning organism and a favorable environment.

Evolution

A variety of glitches in the mechanism for duplicating itself can rearrange one or more portions of the DNA molecule.  If it is a serious enough change the organism or the offspring getting the change may die or be incapable of reproduction.  A minor change will usually be passed on with little effect if it is a region of the DNA not active in producing necessary products.

But those changes or rearrangements of sequences may in rare instances be beneficial to survival of the offspring.  Over time, it may contribute to better reproductive and survival success and the new form will eventually replace the original form.  That is the simplified version of the development of the diverse community of species living on earth.

So what is good for survival?  Whatever works best!  A heavy fur coat if you live in the arctic, a skimpy or missing coat of fur if you live in the tropics.  A trim body may help if food is abundant and the environment is comfortable.  Abundant fat may help you survive if you face long winters or times without food.  Migrate to another environment and your offspring will eventually be quite different from those that didn’t migrate.

The story of evolution is in the DNA.  But it is often easier to find the story in conjunction with the details of the organisms when the intermediate forms are extinct.

*Collins, Francis S.  2006. The Language of God – A Scientist Presents Evidence for Belief.  Free Press, New York.  294 pp.


Joseph G. Engemann        May 2, 2014

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